Publications - HPC-Lab
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HPC-Lab Publications
HPC-Lab Publications
- HPC-Lab PhD and Master theses written under supervision by Prof. Elster can be found under "https://www.ntnu.edu/idi/hpc-lab/past-members"
- A selection of recent journal publications, posts, books, including book and report excerpts. See Elster's listing in the Cristin database
From Cristin 2015-2017:
| 1. | Almeida, Francisco; Assuncao, Marcos D; Barbosa, Jorge; Blanco, Vicente; Brandic, Ivona; Da Costa, Georges; Dolz, Manuel F.; Elster, Anne C.; Jarus, Mateusz; Karatza, Helen D.; Lefèvre, Laurent; Mavridis, Ilias; Oleksiak, Ariel; Orgerie, Anne-Cécile; Pierson, Jean-Marc. Energy monitoring as an essential building block towards sustainable ultrascale systems. Sustainable Computing: Informatics and Systems 2017 s. - NTNU |
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| 2. | Becker, Tobias; Elster, Anne C.; Hasle, Geir Amund Svan; Khan, Malik Muhammad Zaki Murtaza; Kuppuudaiyar, Perumal; Natarajan, Suryanarayanan; Palikareva, Hiristina; Qasim, Muhammad. CloudLightning & HPC: Heterogeneous Computing in the Cloud. ISC; 2017-06-18 - 2017-06-22 NTNU |
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| 3. | Elster, Anne C.. CloudLightning and the OPM-based Use Case. ISC; 2017-06-22 - 2017-06-22 NTNU |
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| 4. | Elster, Anne C.; Khan, Malik Muhammad Zaki Murtaza. Towards PETSc-Based OPM Upscaling of Relative Permability as a Cloud Service. 2016 Rice Oil & Gas HPC Conference; 2016-03-02 - 2016-03-03 NTNU |
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| 5. | Falch, Thomas Løfsgaard; Elster, Anne C.. ImageCL: An image processing language for performance portability on heterogeneous systems. I: Proceedings of the 14th IEEE International Conference on High Performance Computing & Simulation (HPCS 2016). IEEE conference proceedings 2016 ISBN 978-1-5090-2088-1. s. 562-569 NTNU |
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| 6. | Falch, Thomas Løfsgaard; Elster, Anne C.. ImageCL: Language and source‐to‐source compiler for performance portability, load balancing, and scalability prediction on heterogeneous systems. Concurrency and Computation 2017 s. - NTNU |
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| 7. | Falch, Thomas Løfsgaard; Elster, Anne C.. Machine Learning Based Auto-Tuning for Enhanced OpenCL Performance Portability. Proceedings, International Parallel and Distributed Processing Symposium (IPDPS) 2015 NTNU |
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| 8. | Falch, Thomas Løfsgaard; Elster, Anne C.. Machine learning based auto-tuning for enhanced performance portability of OpenCL applications. Concurrency and Computation 2017 ;Volum 29.(8) NTNU |
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| 9. | Helsing, Johan Klokkhammer; Elster, Anne C.. Noise modeler: An interactive editor and library for procedural terrains via continuous generation and compilation of GPU shaders. Lecture Notes in Computer Science 2015 ;Volum 9353. s. 469-474 NTNU |
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| 10. | Khan, Malik Muhammad Zaki Murtaza; Elster, Anne C.. Characterizing Numascale Clusters with GPUs: MPI-Based and GPU Interconnect Benchmarks. I: International Conference on High Performance Computing & Simulation (HPCS). IEEE 2016 ISBN 978-1-5090-2088-1. s. 840-847 NTNU |
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| 11. | Kvam, Johannes; Angelsen, Bjørn Atle J.; Elster, Anne C.. GPU Simulation of Nonlinear Propagation of Dual Band Ultrasound Pulse Complexes. 20th International Symposium on Nonlinear Acoustics; 2015-06-29 - 2015-07-03 NTNU UiO |
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| 12. | Kvam, Johannes; Angelsen, Bjørn Atle J.; Elster, Anne C.. GPU simulation of nonlinear propagation of dual band ultrasound pulse complexes. AIP Conference Proceedings 2015 ;Volum 1685:070003. NTNU |
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| 13. | Lynn, Theo; Xiong, Huanhuan; Dong, Dapeng; Momani, Bilal; Gravvanis, George; Filelis-Papadopoulos, Christos; Elster, Anne C.; Khan, Malik Muhammad Zaki Murtaza; Tzovaras, Dimitrios; Giannoutakis, Konstantinos M.; Petcu, Dana; Neagul, Marian; Dragon, Ioan; Kuppudayar, Perumal; Natarajan, Suryanarayanan; McGrath, Michael; Gaydadjiev, Georgi; Becker, Tobias; Gourinovitch, Anna; Kenny, David; Morrison, John P. CLOUDLIGHTNING: A Framework for a Self-organising and Self-managing Heterogeneous Cloud. I: Proceedings of the 6th International Conference on Cloud Computing and Services Science. SciTePress 2016 ISBN 978-989-758-182-3. NTNU |
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| 14. | Makaratzis, Antonios T.; Khan, Malik Muhammad Zaki Murtaza; Giannoutakis, Konstantinos M.; Elster, Anne C.; Tzovaras, Dimitrios. GPU power modeling of HPC applications for the simulation of heterogeneous clouds. PPAM'17; 2017-09-10 - 2017-09-13 NTNU |
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| 15. | Smistad, Erik; Elster, Anne C.; Lindseth, Frank. Real-time gradient vector flow on GPUs using OpenCL. Journal of Real-Time Image Processing 2015 ;Volum 10.(1) s. 67-74 NTNU SINTEF |
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| 16. | Smistad, Erik; Falch, Thomas Løfsgaard; Bozorgi, Mohammadmehdi; Elster, Anne C.; Lindseth, Frank. Medical image segmentation on GPUs - A comprehensive review. Medical Image Analysis 2015 ;Volum 20.(1) s. 1-18 NTNU SINTEF |
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Older Journal publications (selected):
- Katz, Daniel; Choi, Sou-Cheng T; Maheshwari, Ketan; Loffler, Frank; Turk, Matthew; Hanwell, Marcus D.; Wilkins-Diehr, Nancy; Hetheringston, James; Howison, James; Swenson, Shel; Allen, Gabrielle D; Elster, Anne C.; Berriman, Bruce; Venters, Colin. (2014) Summary of the First Workshop on Sustainable Software for Science: Practice and Experiences (WSSSPE1). Journal of Open Research Software. vol. 2 (1).
- Rudyanto, Rina D; Kerkstra, Sjoerd; Van Rikxoort, Eva M; Smistad, Erik; Elster, Anne C.. (2014) Comparing algorithms for automated vessel segmentation in computed tomography scans of the lung: the VESSEL12 study. Medical Image Analysis. vol. 18 (7).
- Smistad, Erik; Elster, Anne C.; Lindseth, Frank. (2014) GPU accelerated segmentation and centerline extraction of tubular structures from medical images. International Journal of Computer Assisted Radiology and Surgery. vol. 9 (4).
- Smistad, Erik; Falch, Thomas Løfsgaard; Bozorgi, Mohammadmehdi; Elster, Anne C.; Lindseth, Frank. (2014) Medical image segmentation on GPUs - A comprehensive review. Medical Image Analysis. vol. 20 (1).
- Falch, Thomas Løfsgaard; Fløystad, Jostein Bø; Breiby, Dag Werner; Elster, Anne C.. (2013) GPU-Accelerated Visualization of Scattered Point Data. IEEE Access. vol. 1.
- Falch, Thomas Løfsgaard; Fløystad, Jostein Bø; Elster, Anne C.; Breiby, Dag Werner. (2012) Optimization and Parallelization of Ptychography Reconstruction Code. NIK: Norsk Informatikkonferanse.
- Krog, Øystein E; Elster, Anne C.. (2012) Fast GPU-Based Fluid Simulations Using SPH. Lecture Notes in Computer Science. vol. 7134.
- Smistad, Erik; Elster, Anne C.; Lindseth, Frank. (2012) Real-time gradient vector flow on GPUs using OpenCL. Journal of Real-Time Image Processing.
- Smistad, Erik; Elster, Anne C.; Lindseth, Frank. (2012) GPU-Based Airway Segmentation and Centerline Extraction for Image Guided Bronchoscopy. NIK: Norsk Informatikkonferanse.
- Smistad, Erik; Elster, Anne C.; Lindseth, Frank. (2012) Real-Time Surface Extraction and Visualization of Medical Images using OpenCL and GPUs. NIK: Norsk Informatikkonferanse.
- Aqrawi, Ahmed Adnan; Elster, Anne C.. (2011) Bandwidth Reduction Through Multithreaded Compression of Seismic Images. Proceedings, International Parallel and Distributed Processing Symposium (IPDPS).
- Jensen, Rune Erlend; Karlin, Ian; Elster, Anne C.. (2011) Auto-tuning a Matrix Routine for High Performance. NIK: Norsk Informatikkonferanse.
- Meyer, Jan Christian; Elster, Anne C.. (2011) Optimized Barriers for Heterogeneous Systems Using MPI. Proceedings, International Parallel and Distributed Processing Symposium (IPDPS).
- Aksnes, Eirik Ola; Elster, Anne C.. (2010) Pourous Rock Simulations and Lattice Boltzmann on GPUs. Advances in Parallel Computing. vol. 19.
- Elster, Anne C.; Requena, Stéphane. (2010) Parallel Computing with GPUs. Advances in Parallel Computing. vol. 19.
- Hovland, Rune Johan; Elster, Anne C.. (2010) Throughput Computing on Future GPUs. Advances in Parallel Computing. vol. 19.
- Meyer, Jan Christian; Elster, Anne C.. (2010) Performance Modeling of Heterogeneous Systems. Proceedings, International Parallel and Distributed Processing Symposium (IPDPS).
- Natvig, Thorvald; Elster, Anne C.. (2010) Run-Time Analysis and Instrumentation for Communication Overlap Potential. Lecture Notes in Computer Science. vol. 6305.
- Spampinato, Daniele; Elster, Anne C.; Natvig, Thorvald. (2010) Modelling Multi-GPU Systems. Advances in Parallel Computing. vol. 19.
- Elster, Anne C.; Meyer, Jan Christian. (2009) A super-efficient adaptable bit-reversal algorithm for multithreaded architectures. Proceedings, International Parallel and Distributed Processing Symposium (IPDPS).