Publications 2009

Publications 2009

Antezana E, Blondé W, Egaña M, Rutherford A, Stevens R, De Baets B, Mironov V, and Kuiper M (2009) BioGateway: A Semantic Systems Biology Tool for the Life Sciences. BMC Bioinformatics 10(Suppl 10):S11

  • C.-M. Ghim, and E. Almaas. "Two-component genetic switch as a synthetic module with tunable stability."Phys. Rev. Lett. 103, 028101 (2009). [Link ] (PDF-file)
  • A. Navid, and E. Almaas. "Genome-scale reconstruction and analysis of the metabolic network of Yersinia pestis, strain 91001." Mol. BioSyst. 5, 368 (2009). [Link ] (PDF-file)
  • D.-S. Lee, H. Burd, E. Almaas, O. Wiest, A.-L Barabási, Z.N. Oltvai, and V. Kapatral. "Comparative genome-scale metabolic reconstruction and flux balance analysis of multiple Staphylococcus aureus genomes identify novel antimicrobial drug targets." J. Bacteriol. 191, 4015 (2009). [Link ] (PDF-file)
  • Bar, Nadav S. 2009. Analysis of Protein Synthesis Dynamic Model in Eukaryotic Cells: Input Control. Mathematical BioSciences, 219:84–91 (PDF-file)
  • Radde N., Bar N.S., Banaji M., 2009. Graphical methods for analysing feedback in biological networks - A survey International Journal of Systems Science, Taylor & Francis, 2010, 41, 35-46 (PDF-file)
  • Radde N., Bar N.S., Tresch A., 2009. A comparison of likelihoods for dynamic stochastic models of biological networks. Proceedings of Workshop of Computational Biology (WCSB09).
  • Bar, N.S. and Radde, N. Long-term prediction of fish growth under varying ambient temperature using a multiscale dynamic model. BMC Systems Biology 2009, 3:107 doi:10.1186/1752-0509-3-107 (PDF-file)
  • Antezana E, Blondé W, Egaña M, Rutherford A, Stevens R, De Baets B, Mironov V, and Kuiper M (2009). BioGateway: A Semantic Systems Biology Tool for the Life Sciences, BMC Bioinformatics, in press, October 2009.
  • Antezana E, Blondé W, Egaña M, Rutherford A, Stevens R, De Baets B, Mironov V, and Kuiper M (2009) BioGateway: A Semantic Systems Biology Tool for the Life Sciences. BMC Bioinformatics 10(Suppl 10):S11
  • Antezana E, Kuiper M, Mironov V, Biological knowledge management: the emerging role of the Semantic Web technologies (2009), Brief Bioinform 10:392-407.
  • Blondé W, Antezana E, De Baets B, Mironov V, Kuiper M (2009). Metarel: an Ontology to support the inferencing of Semantic Web relations within Biomedical Ontologies. ICBO: International Conference on Biomedical Ontology. Buffalo, NY. Available at Nature Precedings.

Publication archive

Publication archive