Waclaw Marcin Kusnierczyk
Publications
2009
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Schober, Daniel;
Smith, Barry;
Lewis, Suzanna E.;
Kusnierczyk, Waclaw;
Lomax, Jane;
Mungall, Chris.
(2009)
Survey-Based Naming Conventions for Use in OBO Foundry Ontology Development.
BMC Bioinformatics
Academic article
2008
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Kusnierczyk, Waclaw.
(2008)
Taxonomy-based partitioning of the Gene Ontology.
Journal of Biomedical Informatics
Academic article
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Nørsett, Kristin;
Lægreid, Astrid;
Kusnierczyk, Waclaw;
Langaas, Mette;
Ylving, S;
Fossmark, Reidar.
(2008)
Changes in gene expression of gastric mucosa during therapeutic acid inhibition.
European Journal of Gastroenterology and Hepathology
Academic article
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Kusnierczyk, Waclaw.
(2008)
Augmenting Bioinformatics Research with Biomedical Ontologies.
Doktoravhandlinger ved NTNU (78)
Doctoral dissertation
2007
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Kusnierczyk, Waclaw.
(2007)
Taxonomic Partitioning of the Gene Ontology.
Dagstuhl Seminar Proceedings
Academic article
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Kusnierczyk, Waclaw.
(2007)
Taxonomy-Based Partitioning of the Gene Ontology.
Journal of Biomedical Informatics
Academic article
2006
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Kusnierczyk, Waclaw.
(2006)
Nontological Engineering.
Frontiers in Artificial Intelligence and Applications
Academic article
2005
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Hofsli, Eva;
Thommesen, Liv;
Yadetie, Fekadu;
Langaas, Mette;
Kusnierczyk, Waclaw;
Falkmer, Ursula.
(2005)
Identification of novel growth factor-responsive genes in neuroendocrine gastrointestinal tumour cells.
British Journal of Cancer
Academic article
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Kusnierczyk, Waclaw;
Aamodt, Agnar;
Lægreid, Astrid.
(2005)
Knowledge-Intensive Case-Based Support for Automated Explanation of Biological Phenomena.
Academic chapter/article/Conference paper
2003
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Yadetie, Fekadu;
Lægreid, Astrid;
Bakke, Ingunn;
Kusnierczyk, Waclaw;
Komorowski, Jan;
Waldum, Helge.
(2003)
Liver gene expression in rats in response to the peroxisome proliferator-activated receptor-{alpha} agonist ciprofibrate.
Physiological Genomics
Academic article
Journal publications
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Schober, Daniel;
Smith, Barry;
Lewis, Suzanna E.;
Kusnierczyk, Waclaw;
Lomax, Jane;
Mungall, Chris.
(2009)
Survey-Based Naming Conventions for Use in OBO Foundry Ontology Development.
BMC Bioinformatics
Academic article
-
Kusnierczyk, Waclaw.
(2008)
Taxonomy-based partitioning of the Gene Ontology.
Journal of Biomedical Informatics
Academic article
-
Nørsett, Kristin;
Lægreid, Astrid;
Kusnierczyk, Waclaw;
Langaas, Mette;
Ylving, S;
Fossmark, Reidar.
(2008)
Changes in gene expression of gastric mucosa during therapeutic acid inhibition.
European Journal of Gastroenterology and Hepathology
Academic article
-
Kusnierczyk, Waclaw.
(2007)
Taxonomic Partitioning of the Gene Ontology.
Dagstuhl Seminar Proceedings
Academic article
-
Kusnierczyk, Waclaw.
(2007)
Taxonomy-Based Partitioning of the Gene Ontology.
Journal of Biomedical Informatics
Academic article
-
Kusnierczyk, Waclaw.
(2006)
Nontological Engineering.
Frontiers in Artificial Intelligence and Applications
Academic article
-
Hofsli, Eva;
Thommesen, Liv;
Yadetie, Fekadu;
Langaas, Mette;
Kusnierczyk, Waclaw;
Falkmer, Ursula.
(2005)
Identification of novel growth factor-responsive genes in neuroendocrine gastrointestinal tumour cells.
British Journal of Cancer
Academic article
-
Yadetie, Fekadu;
Lægreid, Astrid;
Bakke, Ingunn;
Kusnierczyk, Waclaw;
Komorowski, Jan;
Waldum, Helge.
(2003)
Liver gene expression in rats in response to the peroxisome proliferator-activated receptor-{alpha} agonist ciprofibrate.
Physiological Genomics
Academic article
Part of book/report
-
Kusnierczyk, Waclaw;
Aamodt, Agnar;
Lægreid, Astrid.
(2005)
Knowledge-Intensive Case-Based Support for Automated Explanation of Biological Phenomena.
Academic chapter/article/Conference paper
Report
-
Kusnierczyk, Waclaw.
(2008)
Augmenting Bioinformatics Research with Biomedical Ontologies.
Doktoravhandlinger ved NTNU (78)
Doctoral dissertation
Knowledge Transfer
2007
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Academic lectureKusnierczyk, Waclaw. (2007) Taxonomic Partitioning of the Gene Ontology. Mark A. Musen, Michael Schroeder, Barry Smith Towards Interoperability of Biomedical Ontologies, A Dagstuhl Seminar , Intern. Conf. and Res. Center Schloss Dagstuhl 2007-03-27 - 2007-03-30
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Academic lectureKusnierczyk, Waclaw. (2007) Biomedical Ontologies: Foundations and Design Principles. VIB Department of Plant Systems Biology, UGent AGRONOMICS: Workshop on Ontologies, Standards, and Best Practice , Gent 2007-05-21 - 2007-05-23
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PosterSchober, Daniel; Kusnierczyk, Waclaw; Lewis, Suzanna E.; Lomax, Jane; Mungall, Chris; Rocca-Serra, Philippe. (2007) Towards naming conventions for use in controlled vocabulary and ontology engineering. Bio-Ontology Special Interest Group ISMB Bio-Ontology SIG Workshop , Wien 2007-07-20 -
2006
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Academic lectureKusnierczyk, Waclaw. (2006) Nontological Engineering. International Conference on Formal Ontology in Information Systems (FOIS2006) , Baltimore, Maryland 2006-11-09 - 2006-11-11
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Academic lectureSmith, Barry; Kusnierczyk, Waclaw; Schober, Daniel; Ceusters, Werner. (2006) Towards a Reference Terminology for Ontology Research and Development in the Biomedical Domain. International Workshop on Formal Biomedical Knowledge Representation (KRMED2006) , Baltimore, Maryland 2006-11-08 -
2005
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Academic lectureNørsett, Kristin; Bruland, Torunn; Ween, Ola; Hofsli, Eva; Thommesen, Liv; Misund, Kristine. (2005) Systems biology of the normal and diseased gastrointestinal system. 2nd ESF Functional Genomics Conference 2005-01-10 - 2005-01-13
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Academic lectureKusnierczyk, Waclaw; Aamodt, Agnar; Lægreid, Astrid. (2005) Knowledge-Intensive Case-Based Support for Automated Explanation of Biological Phenomena. International Conference on Case Based Reasoning (ICCBR) , Chicago, IL 2005-08-23 - 2005-08-26
2004
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PosterKusnierczyk, Waclaw; Aamodt, Agnar; Lægreid, Astrid. (2004) Towards Automated Explanation of Gene-Gene Relationships. RECOMB 2004 2004-03-27 - 2004-04-01
2003
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PosterKusnierczyk, Anna; Brembu, Tore; Winge, Per; Kusnierczyk, Waclaw; Bones, Atle M.. (2003) cDNA microarray studies of gene expression profiles in A. thaliana during sulfur starvation experiment. Norsk Biokjemisk Selskap NBS Winter Meeting , Geilo 2003-01-03 -
2002
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PosterMidelfart, Herman; Kusnierczyk, Waclaw Marcin; Hvidsten, Torgeir Rhoden; Lægreid, Astrid; Komorowski, Jan. (2002) Learning Yeast Gene Function from Expression Programs and Gene Ontology. Norwegian Biochemical Society’s Wintermeeting 2002-01-17 - 2002-01-20
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PosterBeisvåg, Vidar; Jølsum, Lars; Kusnierczyk, Waclaw; Langaas, Mette; Alsberg, Bjørn Kåre; Bergum, Hallgeir. (2002) eGOn � a new tool for mapping microarray data onto the Gene Ontology structure. EBI Standards and Ontologies for Functional Genomics , Hinxton 2002-11-17 - 2002-11-20
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Popular scientific lectureYadetie, Fekadu; Bakke, Ingunn; Lægreid, Astrid; Kusnierczyk, Waclaw; Komorowski, Jan; Waldum, Helge. (2002) Analysis of effects of the PPAR alpha agonist ciprofibrate on rat hepatic gene expressions using cDNA microarrays. The 7th IUBMB Conference Receptor-ligand Interactions Molecular, Physiological and Pharmacological Aspects , Bergen 2002-05-08 -