Vidar Beisvåg
Publications
2023
-
Catalan-Serra, Ignacio ;
Thorsvik, Silje;
Beisvag, Vidar;
Bruland, Torunn;
Underhill, David;
Sandvik, Arne Kristian.
(2023)
Fungal Microbiota Composition in Inflammatory Bowel Disease Patients: Characterization in Different Phenotypes and Correlation With Clinical Activity and Disease Course.
Inflammatory Bowel Diseases
Academic article
-
Andersson-Rusch, Clara Leticia;
Quist-Løkken, Ingrid;
Sætrom, Pål;
Beisvag, Vidar;
Rolinski, Milosz;
Aas, Per Arne.
(2023)
Genome-Wide CRISPR/Cas9 Knock-out Screen Identifies Apoptosis-Relevant Genes in Multiple Myeloma.
Blood
Abstract
-
Wiik, Mariann Unhjem;
Negline, Mia;
Beisvag, Vidar;
Clapham, Matthew;
Holliday, Elizabeth;
Dueñas, Nuria.
(2023)
MTHFR C677T and A1298C polymorphism’s effect on risk of colorectal cancer in Lynch syndrome.
Scientific Reports
Academic article
2022
-
Strauss, Philipp;
Rivedal, Mariell;
Scherer, Andreas;
Eikrem, Øystein Solberg;
Nakken, Sigrid;
Beisland, Christian.
(2022)
A multiomics disease progression signature of low-risk ccRCC.
Scientific Reports
Academic article
-
Olaisen, Maya;
Richard, Mathias L.;
Beisvag, Vidar;
Granlund, Atle van Beelen;
Røyset, Elin Synnøve;
Rué, Olivier.
(2022)
The ileal fungal microbiota is altered in Crohn's disease and is associated with the disease course.
Frontiers in medicine
Academic article
-
Sørgjerd, Elin Pettersen;
Mjelle, Robin;
Beisvag, Vidar;
Flatberg, Arnar;
Grill, Valdemar Erik Robert;
Åsvold, Bjørn Olav.
(2022)
Small RNAs are differentially expressed in autoimmune and non-autoimmune diabetes and controls.
European Journal of Endocrinology (EJE)
Academic article
2021
-
Sun, Yi-Qian;
Richmond, Rebecca C.;
Suderman, Matthew;
Min, Josine L;
Battram, Thomas;
Flatberg, Arnar.
(2021)
Assessing the role of genome-wide DNA methylation between smoking and risk of lung cancer using repeated measurements: the HUNT Study.
International Journal of Epidemiology
Academic article
-
Nakken, Sigrid;
Eikrem, Øystein Solberg;
Marti, Hans Peter;
Beisland, Christian;
Bostad, Leif;
Scherer, Andreas.
(2021)
AGAP2-AS1 as a prognostic biomarker in low-risk clear cell renal cell carcinoma patients with progressing disease.
Cancer Cell International
Academic article
2018
-
Eikrem, Øystein Solberg;
Walther, Tedd Christian ;
Flatberg, Arnar;
Beisvag, Vidar;
Strauss, Philipp;
Farstad, Magnus.
(2018)
Fine needle aspirates of kidneys: A promising tool for RNA sequencing in native and transplanted kidneys.
BMC Nephrology
Academic article
-
Strauss, Philipp;
Marti, Hans-Peter;
Beisland, Christian;
Scherer, Andreas;
Lysne, Vegard;
Leh, Sabine Maria.
(2018)
Expanding the utilization of formalin-fixed, paraffin-embedded archives: Feasibility of miR-Seq for disease exploration and biomarker development from biopsies with clear cell renal cell Carcinoma.
International Journal of Molecular Sciences
Academic article
2017
-
Vange, Pål;
Bruland, Torunn;
Doseth, Berit;
Fossmark, Reidar;
Sousa, Mirta;
Beisvag, Vidar.
(2017)
The cytoprotective protein clusterin is overexpressed in hypergastrinemic rodent models of oxyntic preneoplasia and promotes gastric cancer cell survival.
PLOS ONE
Academic article
-
Rustad, Even Holth;
Coward, Eivind;
Skytøen, Emilie R;
Misund, Kristine;
Holien, Toril;
Standal, Therese.
(2017)
Monitoring multiple myeloma by quantification of recurrent mutations in serum.
Haematologica
Academic article
2016
-
Eikrem, Øystein Solberg;
Strauss, Philipp;
Beisland, Christian;
Scherer, Andreas;
Landolt, Lea Zoe;
Flatberg, Arnar.
(2016)
Development and confirmation of potential gene classifiers of human clear cell renal cell carcinoma using next-generation RNA sequencing.
Scandinavian Journal of Urology
Academic article
-
Aasarød, Kristin Matre;
Ramezanzadehkoldeh, Masoud;
Shabestari, Maziar;
Mosti, Mats Peder;
Stunes, Astrid Kamilla;
Reseland, Janne Elin.
(2016)
Skeletal effects of a gastrin receptor antagonist in H+/K+ATPase beta subunit KO mice.
Journal of Endocrinology
Academic article
-
Bhandari, Sabin;
Bakke, Ingunn;
Kumar, J. Dinesh;
Beisvag, Vidar;
Sandvik, Arne Kristian;
Thommesen, Liv.
(2016)
Connective tissue growth factor is activated by gastrin and involved in gastrin-induced migration and invasion.
Biochemical and Biophysical Research Communications - BBRC
Academic article
-
Eikrem, Øystein Solberg;
Beisland, Christian;
Hjelle, Karin Margrethe;
Flatberg, Arnar;
Scherer, Andreas;
Landolt, Lea Zoe.
(2016)
Transcriptome sequencing (RNAseq) enables utilization of formalin-fixed, paraffin-embedded biopsies with clear cell renal cell carcinoma for exploration of disease biology and biomarker development.
PLOS ONE
Academic article
2015
-
Vange, Pål;
Bruland, Torunn;
Beisvag, Vidar;
Erlandsen, Sten Even;
Flatberg, Arnar;
Doseth, Berit.
(2015)
Genome-wide analysis of the oxyntic proliferative isthmus zone reveals ASPM as a possible gastric stem/progenitor cell marker overexpressed in cancer.
Journal of Pathology
Academic article
-
Rustad, Even Holth;
Dai, Hong Yan;
Hov, Håkon;
Coward, Eivind;
Beisvag, Vidar;
Myklebost, Ola.
(2015)
BRAF V600E mutation in early-stage multiple myeloma: good response to broad acting drugs and no relation to prognosis.
Blood Cancer Journal
Academic article
2014
-
Zhao, Chun-Mei;
Kodama, Yosuke;
Flatberg, Arnar;
Beisvag, Vidar;
Kulseng, Bård Eirik;
Sandvik, Arne Kristian.
(2014)
Gene expression profiling of gastric mucosa in mice lacking CCK and gastrin receptors.
Regulatory Peptides
Academic article
-
Zhao, Chun-Mei;
Hayakawa, Yoku;
Kodama, Yosuke;
Muthupalani, Sureshkumar;
Westphalen,, Christoph B.;
Andersen, Gøran Troseth.
(2014)
Denervation suppresses gastric tumorigenesis.
Science Translational Medicine
Academic article
2013
-
Østvik, Ann Elisabet;
Granlund, Atle Van Beelen;
Torp, Sverre Helge;
Flatberg, Arnar;
Beisvag, Vidar;
Waldum, Helge.
(2013)
Expression of Toll-like receptor-3 is enhanced in active inflammatory bowel disease and mediates the excessive release of lipocalin 2.
Clinical and Experimental Immunology
Academic article
-
Selvik, Linn-Karina M.;
Fjeldbo, Christina Sæten;
Flatberg, Arnar;
Steigedal, Tonje;
Misund, Kristine;
Anderssen, Endre.
(2013)
The duration of gastrin treatment affects global gene expression and molecular responses involved in ER stress and anti-apoptosis.
BMC Genomics
Academic article
-
Granlund, Atle Van Beelen;
Flatberg, Arnar;
Østvik, Ann Elisabet;
Drozdov, Ignat;
Gustafsson, Björn;
Kidd, Mark.
(2013)
Whole Genome Gene Expression Meta-Analysis of Inflammatory Bowel Disease Colon Mucosa Demonstrates Lack of Major Differences between Crohn's Disease and Ulcerative Colitis.
PLOS ONE
Academic article
-
Kodama, Yosuke;
Zhao, Chun-Mei;
Muthupalani, Sureshkumar;
Flatberg, Arnar;
Friedman, Richard A.;
Sandvik, Arne.
(2013)
Denervation Suppresses Gastric Cancer Initiation and Progression Through Inhibition of the Cancer Niche.
Gastroenterology
Abstract
2012
-
Granlund, Atle;
Flatberg, Arnar;
Østvik, Ann Elisabet;
Drozdov, I;
Gustafsson, Björn;
Kidd, M.
(2012)
Dissecting the IBD Transcriptome.
Inflammatory Bowel Diseases
Abstract
2011
-
Beisvag, Vidar;
Kauffmann, Audrey;
Malone, James;
Foy, Carole;
Salit, Marc;
Schimmel, H.
(2011)
Contributions of the EMERALD project to assessing and improving microarray data quality.
BioTechniques
Academic article
-
Granlund, Atle Van Beelen;
Beisvag, Vidar;
Torp, Sverre Helge;
Flatberg, Arnar;
Kleveland, Per Martin;
Østvik, Ann Elisabet.
(2011)
Activation of REG family proteins in colitis.
Scandinavian Journal of Gastroenterology
Academic article
2009
-
Beisvag, Vidar;
Kemi, Ole Johan;
Arbo, Ingerid Brænne;
Loennechen, Jan Pål;
Sandvik, Arne Kristian;
Langaas, Mette.
(2009)
Pathological and physiological hypertrophies are regulated by distinct gene programs.
European Journal of Cardiovascular Prevention & Rehabilitation
Academic article
2008
-
Bye, Anja;
Høydal, Morten;
Catalucci, D;
Langaas, Mette;
Kemi, OJ;
Beisvåg, Vidar.
(2008)
Gene expression profiling of skeletal muscle in exercise-trained and sedentary rats with inborn high and low VO2max.
Physiological Genomics
Academic article
-
Juel, Ingebjørg s.;
Solligård, Erik;
Tvedt, Kåre E;
Skogvoll, Eirik;
Jynge, Per;
Beisvåg, Vidar.
(2008)
Post-ischaemic restituted intestinal mucosa is more resistant to further ischaemia than normal mucosa in the pig.
Scandinavian Journal of Clinical and Laboratory Investigation
Academic article
2007
-
Beisvåg, Vidar;
Ellingsen, Øyvind;
Lægreid, Astrid;
Sandvik, Arne Kristian.
(2007)
Physiological Genomics of Heart Failure: From Technology to Physiology.
NTNU
Doctoral dissertation
-
Bruland, Torunn;
Anderssen, Endre;
Eitrem, Berit Doseth;
Bergum, Hallgeir;
Beisvåg, Vidar;
Lægreid, Astrid.
(2007)
Optimization of cDNA microarrays procedures using criteria that do not rely on external standards.
BMC Genomics
Academic article
2006
-
Beisvåg, Vidar;
Lehre, Per Kristian;
Midelfart, Herman;
Aass, H;
Geiran, O;
Sandvik, Arne Kristian.
(2006)
Aetiology-specific patterns in end-stage heart failure patients identified by functional annotation and classification of microarray data.
European Journal of Heart Failure
Academic article
-
Beisvåg, Vidar;
Jünge, Frode KR;
Bergum, Hallgeir;
Jølsum, Lars;
Lydersen, Stian;
Gunther, Clara-Cecilie.
(2006)
GeneTools - application for functional annotation and statistical hypothesis testing.
BMC Bioinformatics
Book review
2003
-
Beisvåg, Vidar;
Falck, G;
Loennechen, Jan P.;
Qvigstad, Gunnar;
Jynge, Per;
Skomedal, Tor.
(2003)
Identification and regulation of the gastric H+/K+-ATPase in the rat heart.
Acta Physiologica Scandinavica
Academic article
-
Beisvåg, Vidar;
Falck, G.;
Loenneche, Jan P.;
Qvigstad, G;
Jynge, Per;
Skomedal, T..
(2003)
Identification and regulation of the gastric H+/K+ATPase in the rat heart.
Acta Physiologica Scandinavica
Academic article
2001
-
Loenneche, Jan P.;
Wisløff, Ulrik;
Støylen, Asbjørn;
Beisvåg, Vidar;
Ellingsen, Øyvind.
(2001)
Regional expression of endothelin-1, ANP, IGF-1, and LV wall stress in the infarcted rat heart.
American Journal of Physiology. Heart and Circulatory Physiology
Academic article
2000
-
Medbø, Sverre;
Beisvåg, Vidar;
Tollofsrud, PA;
Ellingsen, Øyvind;
Wright, MS.
(2000)
Attenuated endothelin- mRNA expression with endothelin- receptor blockade during hypoxaemia and reoxygenation in newborn piglets.
Acta Paediatrica
Academic article
-
Lægreid, Astrid;
Komorowski, Jan;
Sandvik, Arne Kristian;
Hovig, Eivind;
Forus, Anne;
Smith-Sørensen, Birgitte.
(2000)
DNA mikroarray - vindu mot tusentals gen.
NBS-nytt
Academic article
1999
-
Loenneche, Jan P.;
Beisvåg, Vidar;
Arbo, Ingerid;
Waldum, Helge;
Sandvik, AK;
Knardahl, Stein.
(1999)
Chronic carbon monoxide exposure in vivo induces myocardial endothelin-1 expression and hypertrophy in rat.
Pharmacology and Toxicology
Academic article
1996
-
Beisvåg, Vidar.
(1996)
Molekylærbiologisk studie av myrosinase-glukosinolat systemet i Brassicaceae.
NTNU. Botanisk inst.
Thesis at a second degree level
Journal publications
-
Catalan-Serra, Ignacio ;
Thorsvik, Silje;
Beisvag, Vidar;
Bruland, Torunn;
Underhill, David;
Sandvik, Arne Kristian.
(2023)
Fungal Microbiota Composition in Inflammatory Bowel Disease Patients: Characterization in Different Phenotypes and Correlation With Clinical Activity and Disease Course.
Inflammatory Bowel Diseases
Academic article
-
Andersson-Rusch, Clara Leticia;
Quist-Løkken, Ingrid;
Sætrom, Pål;
Beisvag, Vidar;
Rolinski, Milosz;
Aas, Per Arne.
(2023)
Genome-Wide CRISPR/Cas9 Knock-out Screen Identifies Apoptosis-Relevant Genes in Multiple Myeloma.
Blood
Abstract
-
Wiik, Mariann Unhjem;
Negline, Mia;
Beisvag, Vidar;
Clapham, Matthew;
Holliday, Elizabeth;
Dueñas, Nuria.
(2023)
MTHFR C677T and A1298C polymorphism’s effect on risk of colorectal cancer in Lynch syndrome.
Scientific Reports
Academic article
-
Strauss, Philipp;
Rivedal, Mariell;
Scherer, Andreas;
Eikrem, Øystein Solberg;
Nakken, Sigrid;
Beisland, Christian.
(2022)
A multiomics disease progression signature of low-risk ccRCC.
Scientific Reports
Academic article
-
Olaisen, Maya;
Richard, Mathias L.;
Beisvag, Vidar;
Granlund, Atle van Beelen;
Røyset, Elin Synnøve;
Rué, Olivier.
(2022)
The ileal fungal microbiota is altered in Crohn's disease and is associated with the disease course.
Frontiers in medicine
Academic article
-
Sørgjerd, Elin Pettersen;
Mjelle, Robin;
Beisvag, Vidar;
Flatberg, Arnar;
Grill, Valdemar Erik Robert;
Åsvold, Bjørn Olav.
(2022)
Small RNAs are differentially expressed in autoimmune and non-autoimmune diabetes and controls.
European Journal of Endocrinology (EJE)
Academic article
-
Sun, Yi-Qian;
Richmond, Rebecca C.;
Suderman, Matthew;
Min, Josine L;
Battram, Thomas;
Flatberg, Arnar.
(2021)
Assessing the role of genome-wide DNA methylation between smoking and risk of lung cancer using repeated measurements: the HUNT Study.
International Journal of Epidemiology
Academic article
-
Nakken, Sigrid;
Eikrem, Øystein Solberg;
Marti, Hans Peter;
Beisland, Christian;
Bostad, Leif;
Scherer, Andreas.
(2021)
AGAP2-AS1 as a prognostic biomarker in low-risk clear cell renal cell carcinoma patients with progressing disease.
Cancer Cell International
Academic article
-
Eikrem, Øystein Solberg;
Walther, Tedd Christian ;
Flatberg, Arnar;
Beisvag, Vidar;
Strauss, Philipp;
Farstad, Magnus.
(2018)
Fine needle aspirates of kidneys: A promising tool for RNA sequencing in native and transplanted kidneys.
BMC Nephrology
Academic article
-
Strauss, Philipp;
Marti, Hans-Peter;
Beisland, Christian;
Scherer, Andreas;
Lysne, Vegard;
Leh, Sabine Maria.
(2018)
Expanding the utilization of formalin-fixed, paraffin-embedded archives: Feasibility of miR-Seq for disease exploration and biomarker development from biopsies with clear cell renal cell Carcinoma.
International Journal of Molecular Sciences
Academic article
-
Vange, Pål;
Bruland, Torunn;
Doseth, Berit;
Fossmark, Reidar;
Sousa, Mirta;
Beisvag, Vidar.
(2017)
The cytoprotective protein clusterin is overexpressed in hypergastrinemic rodent models of oxyntic preneoplasia and promotes gastric cancer cell survival.
PLOS ONE
Academic article
-
Rustad, Even Holth;
Coward, Eivind;
Skytøen, Emilie R;
Misund, Kristine;
Holien, Toril;
Standal, Therese.
(2017)
Monitoring multiple myeloma by quantification of recurrent mutations in serum.
Haematologica
Academic article
-
Eikrem, Øystein Solberg;
Strauss, Philipp;
Beisland, Christian;
Scherer, Andreas;
Landolt, Lea Zoe;
Flatberg, Arnar.
(2016)
Development and confirmation of potential gene classifiers of human clear cell renal cell carcinoma using next-generation RNA sequencing.
Scandinavian Journal of Urology
Academic article
-
Aasarød, Kristin Matre;
Ramezanzadehkoldeh, Masoud;
Shabestari, Maziar;
Mosti, Mats Peder;
Stunes, Astrid Kamilla;
Reseland, Janne Elin.
(2016)
Skeletal effects of a gastrin receptor antagonist in H+/K+ATPase beta subunit KO mice.
Journal of Endocrinology
Academic article
-
Bhandari, Sabin;
Bakke, Ingunn;
Kumar, J. Dinesh;
Beisvag, Vidar;
Sandvik, Arne Kristian;
Thommesen, Liv.
(2016)
Connective tissue growth factor is activated by gastrin and involved in gastrin-induced migration and invasion.
Biochemical and Biophysical Research Communications - BBRC
Academic article
-
Eikrem, Øystein Solberg;
Beisland, Christian;
Hjelle, Karin Margrethe;
Flatberg, Arnar;
Scherer, Andreas;
Landolt, Lea Zoe.
(2016)
Transcriptome sequencing (RNAseq) enables utilization of formalin-fixed, paraffin-embedded biopsies with clear cell renal cell carcinoma for exploration of disease biology and biomarker development.
PLOS ONE
Academic article
-
Vange, Pål;
Bruland, Torunn;
Beisvag, Vidar;
Erlandsen, Sten Even;
Flatberg, Arnar;
Doseth, Berit.
(2015)
Genome-wide analysis of the oxyntic proliferative isthmus zone reveals ASPM as a possible gastric stem/progenitor cell marker overexpressed in cancer.
Journal of Pathology
Academic article
-
Rustad, Even Holth;
Dai, Hong Yan;
Hov, Håkon;
Coward, Eivind;
Beisvag, Vidar;
Myklebost, Ola.
(2015)
BRAF V600E mutation in early-stage multiple myeloma: good response to broad acting drugs and no relation to prognosis.
Blood Cancer Journal
Academic article
-
Zhao, Chun-Mei;
Kodama, Yosuke;
Flatberg, Arnar;
Beisvag, Vidar;
Kulseng, Bård Eirik;
Sandvik, Arne Kristian.
(2014)
Gene expression profiling of gastric mucosa in mice lacking CCK and gastrin receptors.
Regulatory Peptides
Academic article
-
Zhao, Chun-Mei;
Hayakawa, Yoku;
Kodama, Yosuke;
Muthupalani, Sureshkumar;
Westphalen,, Christoph B.;
Andersen, Gøran Troseth.
(2014)
Denervation suppresses gastric tumorigenesis.
Science Translational Medicine
Academic article
-
Østvik, Ann Elisabet;
Granlund, Atle Van Beelen;
Torp, Sverre Helge;
Flatberg, Arnar;
Beisvag, Vidar;
Waldum, Helge.
(2013)
Expression of Toll-like receptor-3 is enhanced in active inflammatory bowel disease and mediates the excessive release of lipocalin 2.
Clinical and Experimental Immunology
Academic article
-
Selvik, Linn-Karina M.;
Fjeldbo, Christina Sæten;
Flatberg, Arnar;
Steigedal, Tonje;
Misund, Kristine;
Anderssen, Endre.
(2013)
The duration of gastrin treatment affects global gene expression and molecular responses involved in ER stress and anti-apoptosis.
BMC Genomics
Academic article
-
Granlund, Atle Van Beelen;
Flatberg, Arnar;
Østvik, Ann Elisabet;
Drozdov, Ignat;
Gustafsson, Björn;
Kidd, Mark.
(2013)
Whole Genome Gene Expression Meta-Analysis of Inflammatory Bowel Disease Colon Mucosa Demonstrates Lack of Major Differences between Crohn's Disease and Ulcerative Colitis.
PLOS ONE
Academic article
-
Kodama, Yosuke;
Zhao, Chun-Mei;
Muthupalani, Sureshkumar;
Flatberg, Arnar;
Friedman, Richard A.;
Sandvik, Arne.
(2013)
Denervation Suppresses Gastric Cancer Initiation and Progression Through Inhibition of the Cancer Niche.
Gastroenterology
Abstract
-
Granlund, Atle;
Flatberg, Arnar;
Østvik, Ann Elisabet;
Drozdov, I;
Gustafsson, Björn;
Kidd, M.
(2012)
Dissecting the IBD Transcriptome.
Inflammatory Bowel Diseases
Abstract
-
Beisvag, Vidar;
Kauffmann, Audrey;
Malone, James;
Foy, Carole;
Salit, Marc;
Schimmel, H.
(2011)
Contributions of the EMERALD project to assessing and improving microarray data quality.
BioTechniques
Academic article
-
Granlund, Atle Van Beelen;
Beisvag, Vidar;
Torp, Sverre Helge;
Flatberg, Arnar;
Kleveland, Per Martin;
Østvik, Ann Elisabet.
(2011)
Activation of REG family proteins in colitis.
Scandinavian Journal of Gastroenterology
Academic article
-
Beisvag, Vidar;
Kemi, Ole Johan;
Arbo, Ingerid Brænne;
Loennechen, Jan Pål;
Sandvik, Arne Kristian;
Langaas, Mette.
(2009)
Pathological and physiological hypertrophies are regulated by distinct gene programs.
European Journal of Cardiovascular Prevention & Rehabilitation
Academic article
-
Bye, Anja;
Høydal, Morten;
Catalucci, D;
Langaas, Mette;
Kemi, OJ;
Beisvåg, Vidar.
(2008)
Gene expression profiling of skeletal muscle in exercise-trained and sedentary rats with inborn high and low VO2max.
Physiological Genomics
Academic article
-
Juel, Ingebjørg s.;
Solligård, Erik;
Tvedt, Kåre E;
Skogvoll, Eirik;
Jynge, Per;
Beisvåg, Vidar.
(2008)
Post-ischaemic restituted intestinal mucosa is more resistant to further ischaemia than normal mucosa in the pig.
Scandinavian Journal of Clinical and Laboratory Investigation
Academic article
-
Bruland, Torunn;
Anderssen, Endre;
Eitrem, Berit Doseth;
Bergum, Hallgeir;
Beisvåg, Vidar;
Lægreid, Astrid.
(2007)
Optimization of cDNA microarrays procedures using criteria that do not rely on external standards.
BMC Genomics
Academic article
-
Beisvåg, Vidar;
Lehre, Per Kristian;
Midelfart, Herman;
Aass, H;
Geiran, O;
Sandvik, Arne Kristian.
(2006)
Aetiology-specific patterns in end-stage heart failure patients identified by functional annotation and classification of microarray data.
European Journal of Heart Failure
Academic article
-
Beisvåg, Vidar;
Jünge, Frode KR;
Bergum, Hallgeir;
Jølsum, Lars;
Lydersen, Stian;
Gunther, Clara-Cecilie.
(2006)
GeneTools - application for functional annotation and statistical hypothesis testing.
BMC Bioinformatics
Book review
-
Beisvåg, Vidar;
Falck, G;
Loennechen, Jan P.;
Qvigstad, Gunnar;
Jynge, Per;
Skomedal, Tor.
(2003)
Identification and regulation of the gastric H+/K+-ATPase in the rat heart.
Acta Physiologica Scandinavica
Academic article
-
Beisvåg, Vidar;
Falck, G.;
Loenneche, Jan P.;
Qvigstad, G;
Jynge, Per;
Skomedal, T..
(2003)
Identification and regulation of the gastric H+/K+ATPase in the rat heart.
Acta Physiologica Scandinavica
Academic article
-
Loenneche, Jan P.;
Wisløff, Ulrik;
Støylen, Asbjørn;
Beisvåg, Vidar;
Ellingsen, Øyvind.
(2001)
Regional expression of endothelin-1, ANP, IGF-1, and LV wall stress in the infarcted rat heart.
American Journal of Physiology. Heart and Circulatory Physiology
Academic article
-
Medbø, Sverre;
Beisvåg, Vidar;
Tollofsrud, PA;
Ellingsen, Øyvind;
Wright, MS.
(2000)
Attenuated endothelin- mRNA expression with endothelin- receptor blockade during hypoxaemia and reoxygenation in newborn piglets.
Acta Paediatrica
Academic article
-
Lægreid, Astrid;
Komorowski, Jan;
Sandvik, Arne Kristian;
Hovig, Eivind;
Forus, Anne;
Smith-Sørensen, Birgitte.
(2000)
DNA mikroarray - vindu mot tusentals gen.
NBS-nytt
Academic article
-
Loenneche, Jan P.;
Beisvåg, Vidar;
Arbo, Ingerid;
Waldum, Helge;
Sandvik, AK;
Knardahl, Stein.
(1999)
Chronic carbon monoxide exposure in vivo induces myocardial endothelin-1 expression and hypertrophy in rat.
Pharmacology and Toxicology
Academic article
Report
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Beisvåg, Vidar;
Ellingsen, Øyvind;
Lægreid, Astrid;
Sandvik, Arne Kristian.
(2007)
Physiological Genomics of Heart Failure: From Technology to Physiology.
NTNU
Doctoral dissertation
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Beisvåg, Vidar.
(1996)
Molekylærbiologisk studie av myrosinase-glukosinolat systemet i Brassicaceae.
NTNU. Botanisk inst.
Thesis at a second degree level
Teaching
Courses
Outreach
2023
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PosterAndersson-Rusch, Clara Leticia; Quist-Løkken, Ingrid; Sætrom, Pål; Beisvag, Vidar; Rolinski, Milosz; Møen, Johanna. (2023) Genome-Wide CRISPR/Cas9 Knock-out Screen Identifies Apoptosis-Relevant Genes in Multiple Myeloma. American Society of Hematology 65th ASH Annual Meeting and Exposition 2023-12-09 - 2023-12-12
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Academic lectureHaslene-Hox, Hanne; Chahal, Aman Singh; Arlov, Øystein; Øynebråten, Ingrid Ryge; Zaytseva-Zotova, Daria; Vikenes, Anette. (2023) Alginate hydrogel characteristics regulate fibroblast biology. Norsk Biokjemisk selskap Norsk Biokjemisk selskaps kontaktmøte 2023 , Storefjell 2023-01-19 - 2023-01-22
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PosterZaytseva-Zotova, Daria; Haslene-Hox, Hanne; Arlov, Øystein; Hoel, Andrea Draget; Mjelle, Robin; Strand, Wenche. (2023) Alginate hydrogel characteristics regulate NHDF biology. ESB European Society for Biomaterials , Davos, Switzerland 2023-09-03 - 2023-09-08
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PosterStrand, Berit Løkensgard; Haslene-Hox, Hanne; Sætrom, Pål; Zaytseva-Zotova, Daria; Mjelle, Robin; Arlov, Øystein. (2023) Alginate hydrogel characteristics regulate NHDF biology. Scandinavian Society of Biomaterials ScSB 2023 , Røros, Norway 2023-03-21 - 2023-08-24
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Academic lectureOlaisen, Maya; Richard, Mathias L.; Beisvåg, Vidar; Granlund, Atle van Beelen; Røyset, Elin Synnøve; Rue, Oliver. (2023) Soppmikrobiota i ileum er endret ved Crohns sykdom og er assosiert med sykdomsforløp. Norsk gastroenterologisk forening Norsk gastroenterologisk forenings årsmøte , Lillehammer 2023-02-09 - 2023-02-11
2021
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PosterZaytseva-Zotova, Daria; Haslene-Hox, Hanne; Arlov, Øystein; Vikenes, Anette; Hoel, Andrea Draget; Chahal, Aman S. (2021) Alginate Hydrogel Characteristics Regulate Dermal Fibroblasts Biology. Scandinavian Society for Biomaterials ScSB 2021 , online 2021-06-14 - 2021-06-14
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PosterOlaisen, Maya; Richard, Mathias L; Beisvag, Vidar; Granlund, Atle van Beelen; Røyset, Elin Synnøve; Martinsen, Tom Christian. (2021) Fungal microbiota in the ileal mucosa of patients with Crohn’s disease . UEG United european gastroenterology Week , Virtual 2021-10-02 - 2021-10-06
2020
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PosterZaytseva-Zotova, Daria; Haslene-Hox, Hanne; Arlov, Øystein; Vikenes, Anette; Hoel, Andrea Draget; Chahal, Aman S. (2020) Varying single parameters of the alginate hydrogels to design better microenvironments for fibroblasts cultivation in vitro. WBC2020 2020-12-11 - 2020-12-15
2019
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PosterGranlund, Atle van Beelen; Thorsvik, Silje; Catalan-Serra, Ignacio ; Sandvik, Arne Kristian; Underhill, David; Beisvag, Vidar. (2019) Characterization of fungal microbiota in a Norwegian IBD cohort. European Crohn's and Colitis Foundation ECCO 2019 , København 2019-03-06 - 2019-03-09
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Academic lectureStrauss, Philipp; Eikrem, Øystein Solberg; Tøndel, Camilla; Svarstad, Einar; Scherer, Andreas; Leh, Sabine Maria. (2019) Fabry Nephropathy: First mRNA-seq Findings from Kidney Biopsies Before and After Enzyme Replacement Therapy. 6th Fabry Disease Update , Prague Nephron DOI: 10.1159/000500644 2019-05-26 - 2019-05-28
2018
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PosterKoch, Even Evjen; Eikrem, Øystein Solberg; Flatberg, Arnar; Beisvag, Vidar; Strauss, Philipp; Farstad, Magnus. (2018) Fine needle aspirates of kidneys are usable for RNA sequencing like regular core biopsies. ERA-EDTA 2018 2018-05-24 - 2018-05-27
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PosterStrauss, Philipp; Koch, Even Evjen; Marti, Hans-Peter; Beisland, Christian; Scherer, Andreas; Leh, Sabine Maria. (2018) Expanding the utilization of formalin-fixed, paraffin-embedded archives: Feasability of miRNA-sequencing for disease exploration and biomarker development from biopsies with clear cell renal cell carcinoma. ERA-EDTA 2018 2018-05-24 - 2018-05-27
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PosterHalaas, Øyvind; Sætrom, Pål; Arlov, Øystein; Haslene-Hox, Hanne; Beisvag, Vidar; Aachmann, Finn Lillelund. (2018) 3DLife – Emulating life in 3D with digital and experimental tissue models. Digital Life Norway DigitalLife 2018 , Bergen 2018-03-20 - 2018-03-21
2016
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Academic lectureBeisvag, Vidar; Bakke, Ingunn; Andersen, Gøran Troseth; Zhao, Chun-Mei; Chen, Duan; Waldum, Helge. (2016) Signet ring cell carcinomas identified as a molecular subtype of gastric cancer. American Society for Gastrointestinal Endoscopy (ASGE) Digestive Disease Week 2016 , San Diego, CA 2016-05-21 - 2016-05-24
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PosterSvendsen, Tarjei Dahl; Furnes, Marianne Waldum; Brenna, Øystein; Zwiggelaar, Rosalie; Ryeng, Einar; Lie, Kai-Inge. (2016) A longitudinal study of the gut microbiome in the IL-10 -/- mice model of coloenteritis reveals correlations between diet, gene expression and inflammation. European Mucosal Immunology Group European Mucosal Immunology Group meeting , Copenhagen 2016-10-19 - 2016-10-21
2015
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Academic lectureAasarød, Kristin Matre; Ramezanzadehkoldeh, Masoud; Shabestari, Maziar; Mosti, Mats Peder; Stunes, Astrid Kamilla; Reseland, Janne Elin. (2015) Den osteoporotiske fenotypen til H+/K+ATPase beta-subunit KO mus bedres av en gastrinreseptorantagonist, men ikke av en histamin-1-reseptorantagonist. Norsk gastroenterologisk forening Norsk gastroenterologisk forenings årsmøte , Lillehammer 2015-02-05 - 2015-02-07
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PosterGranlund, Atle van Beelen; Thorsvik, Silje; Beisvag, Vidar; Flatberg, Arnar; Bakke, Ingunn; Sandvik, Arne Kristian. (2015) Exploring the barrier; RNA sequencing of laser microdissected epithelium from IBD patients. ECCO 10th congress of European Crohn's and Colitis Organisation , Barcelona 2015-02-18 - 2015-02-21
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Academic lectureVange, Pål; Bruland, Torunn; Beisvag, Vidar; Erlandsen, Sten Even; Doseth, Berit; Sandvik, Arne Kristian. (2015) Genome-wide analysis of the oxyntic proliferative isthmus zone reveals ASPM as a putative gastric stem/progenitor cell marker overexpressed in cancer. AASLD, AGA, ASGE, SSAT Digestive Disease Week 2015 , Washington DC 2015-05-16 - 2015-05-19
2014
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Academic lectureAasarød, Kristin Matre; Ramezanzadehkoldeh, Masoud; Mosti, Mats Peder; Stunes, Astrid Kamilla; Viggaklev, Bjørn Ivar; Reseland, Janne Elin. (2014) Skeletal effects of the gastrin receptor antagonist netazepide in H+/K+-ATPase beta-subunit deficient mice. European Calcified Tissue Society European Calcified Tissue Society , Praha 2014-05-17 - 2014-05-20
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PosterVange, Pål; Beisvag, Vidar; Flatberg, Arnar; Afroz, Wahida; Nordrum, Ivar Skjåk; Sørdal, Øystein Finset. (2014) Molecular mechanisms of cellular stress responses in gastric cancer. AASLD, AGA, ASGE, SSAT Digestive Disease Week 2014 , Chicago 2014-05-03 - 2014-05-06
2013
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PosterKodama, Yosuke; Zhao, Chun-Mei; Muthupalani, Sureshkumar; Flatberg, Arnar; Friedman, Richard A.; Sandvik, Arne. (2013) Denervation Suppresses Gastric Cancer Initiation and Progression Through Inhibition of the Cancer Niche. Digestive Disease Week 2013 , Orlando, Florida 2013-05-18 - 2013-05-21
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Academic lectureChen, Duan; Yosuke, Kodama; Zhao, Chun-Mei; Sureshkuma, Muthupalani; Yoku, Hayakawa; Flatberg, Arnar. (2013) Denervation suppresses Gastric Tumorigenesis. 15th Taithotoyama International Symposium on Gastroenterology. , Tokyo 2013-09-26 - 2013-09-28
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PosterVange, Pål; Beisvag, Vidar; Flatberg, Arnar; Rao, Shalini; Sandvik, Arne Kristian; Thommesen, Liv. (2013) Gastric cancer biology – clusterin facilitates the growth promoting effects of gastrin. Norwegian Biochemical Society (NBS) NBS Contact Meeting 2013 , Lillehammer 2013-01-31 - 2013-02-03
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Academic lectureVange, Pål; Erlandsen, Sten Even; Flatberg, Arnar; Beisvag, Vidar; Bruland, Torunn; Sandvik, Arne. (2013) Gene expression analysis of the proliferative zone in gastric oxyntic mucosa. Medisinske forskerlinjestudenter ved UiT; Frampeik 2013 Legestudentenes forskningskonferanse (Frampeik) , Oslo 2013-10-18 - 2013-10-20
2010
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PosterBruland, Torunn; Anderssen, Endre; Misund, Kristine; Fjeldbo, Christina Sæten; Flatberg, Arnar; Selvik, Linn-Karina M.. (2010) Exploring signal-induced cellular regulatory subnetworks by use of partial least square regression (PLSR) multidimensional analysis of gene expression time series data. The MGED Society 13th Annual MGED meeting , Boston, Massachusetts, USA , Boston 2010-07-13 - 2010-07-15
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PosterBye, Anja; Beisvag, Vidar; Høydal, Morten Andre; Johnsen, Anne Berit; Alves, Marcia; Koch, Lauren G. (2010) Proteomic profiling of skeletal muscle and serum from rats with genetically determined high and low VO2max. Chronic Heart Failure Symposium 2010-09-30 - 2010-10-01
2009
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PosterBruland, Torunn; Anderssen, Endre; Misund, Kristine; Beisvag, Vidar; Sandvik, Arne Kristian; Thommesen, Liv. (2009) Discovering basic network motifs that underlie gastrin induced gene expression. ICSB The 10th International Conference on System Biology ICSB-2009, USA , Standford, Calefornia 2009-08-30 - 2009-09-04
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PosterBruland, Torunn; Anderssen, Endre; Misund, Kristine; Beisvåg, Vidar; Sandvik, Arne K.; Lægreid, Astrid. (2009) Discovering basic network motifs that underlie gastrin induced gene expression. 10th international conference on system biology , San Francisco 2009-08-30 - 2009-09-04
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PosterBeisvag, Vidar; Sandvik, Arne Kristian; Kuiper, Martin. (2009) EMERALD – Enhancing Microarray Data Quality. Microarray Gene expression and Data Society MGED12 , Phoenix, Arizona 2009-10-05 - 2009-10-08
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PosterBeisvag, Vidar; Sandvik, Arne Kristian; Kuiper, Martin. (2009) EMERALD – Enhancing Microarray Data Quality. Select Bioscineces The 5th Advinces in Microarray Technology 2009 , Stockholm 2009-05-18 - 2009-05-20
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PosterBeisvag, Vidar; Sandvik, Arne Kristian; Kuiper, Martin. (2009) EMERALD – Enhancing Microarray Data Quality. Norsk Biokjemisk Selskap Norsk Biokjemisk Selskap Kontaktmøte 2009 , Røros 2009-01-29 - 2009-01-31
2008
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Academic lectureBrakstad, Odd Gunnar; Beisvag, Vidar; Kotlar, Hans Kristian. (2008) A 16S rDNA microarray for oil reservoirs – challenges and possibilities. Extremophiles 2008: 6th International Conference on Extremophiles , Cape Town 2008-09-07 - 2008-09-10
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Academic lectureBye, Anja; Høydal, Morten; Catalucci, Daniele; Langaas, Mette; Kemi, Ole Johan; Beisvåg, Vidar. (2008) Gene expression profiling of skeletal muscle in exercise trained and sedentary rats with inborn high and low aerobic capacity. Euro Prevent 2008 , Paris 2008-05-01 - 2008-05-03
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PosterGranlund, Atle Van Beelen; Bergum, Hallgeir; Christensen, Tone; Beisvåg, Vidar; Anderssen, Endre; Sandvik, Arne Kristian. (2008) Norwegian Microarray Consortium. Norsk biokjemisk selskap Norsk biokjemisk kontaktmøte 2008 , Lillehammer 2008-01-17 - 2008-01-19
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PosterBeisvåg, Vidar; Sandvik, Arne Kristian; Kuiper, Martin Tremen R.. (2008) EMERALD – Enhancing Microarray Data Quality. Norsk Biokjemisk Selskap Norsk Biokjemisk Kontaktmøte 2008 , Lillehammer 2008-01-17 - 2008-01-19
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PosterBeisvåg, Vidar; Sandvik, Arne Kristian; Kuiper, Marius Tremen Roelof. (2008) EMERALD – Enhancing Microarray Data Quality. the Microarray and Gene Expression Data Society 11th International Meeting of MGED , Riva Del Garda 2008-09-01 - 2008-09-06
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PosterBeisvåg, Vidar; Sandvik, Arne Kristian; Kuiper, Marius Tremen Roelof. (2008) EMERALD – Enhancing Microarray Data Quality. CAMDA The eigth international conference for the Critical Assessment of Microarray Data Analysis (CAMDA 2008) , Vien 2008-12-04 - 2008-12-06
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PosterBeisvåg, Vidar; Sandvik, Arne Kristian; Kuiper, Marius Tremen Roelof. (2008) EMERALD – Enhancing Microarray Data Quality. European Molecular Biology Organisation (EMBO) 4th EMBO Conference: From Functional Genomics to Systems Biology , EMBL, Heidelberg 2008-11-15 - 2008-11-18
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PosterBeisvåg, Vidar; Sandvik, Arne Kristian; Kuiper, Martin Tremen R.. (2008) EMERALD – Enhancing Microarray Data Quality. The Consortium of Post Genomse Sceince Genomes to Systems 2008 , Manchester 2008-03-17 - 2008-03-19
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PosterBeisvåg, Vidar; Sandvik, Andreas; Kuiper, Marius Tremen Roelof. (2008) EMERALD – Enhancing Microarray Data Quality. The Consortium of European project PROUST: the Temporal Dime Genes at work on time , Torina 2008-10-15 - 2008-10-18
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PosterBeisvåg, Vidar; Kuiper, Marius Tremen Roelof; Sandvik, Arne Kristian. (2008) EMERALD – Enhancing Microarray Data Quality. European Scinece Foundation 3rd ESF Conference on Functional Genomics and Disease , Innsbruck 2008-10-01 - 2008-10-04
2007
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PosterKuiper, Martin; Sandvik, Arne Kristian; Brazma, Alvis; Foy, Carole; Dopazo, Joaquin; Philipp, Wolfgang. (2007) EMERALD- European Project on Quality Metricks, Standards and Standardisation of Microarray Technology and Data Analysis. Microarray and Gene Expression Data Society MGED-10/AMATA-7 , Brisbane 2007-09-03 - 2007-09-05
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PosterBeisvåg, Vidar; Sandvik, Arne Kristian; Kuiper, Marius Tremen Roelof. (2007) EMERALD – Enhancing Microarray Data Quality. Bioinformatics Department, Centro de Investigación Principe CAMDA 2007 (The seventh international conference for the Critical Assessment of Microarray Data Analysis (CAMDA 07) , Valencia, Spain 2007-12-12 - 2007-12-14
2006
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PosterBruland, Torunn; Anderssen, Endre; Eitrem, Berit Doseth; Bergum, Hallgeir; Beisvåg, Vidar; Lægreid, Astrid. (2006) Optimization of cDNA microarrays procdures using optimization criteria that does not rely on an external standard. The 7th International Conference on System Biology Poster presentation ICSB-2006 Japan , Yokohama 2006-10-09 - 2006-10-13
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PosterGünther, Clara-Cecilie; Langaas, Mette; Lydersen, Stian; Beisvåg, Vidar; Junge, Frode Romstad Krohn; Bergum, Hallgeir. (2006) Statistical hypothesis testing of association between two lists of genes. Chalmers Statistics for gene and protein expression workshop , Gøteborg 2006-05-09 - 2006-05-11
2005
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Academic lectureLægreid, Astrid; Thommesen, Liv; Bruland, Torunn; Ween, Ola; Sandvik, Arne K.; Bergum, Hallgeir. (2005) System biology of the normal and diseased gastrointestinal system. 8th International meeting of microarray gene expression data society , Bergen 2005-09-11 - 2005-09-13
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Academic lectureWeen, Ola; Beisvåg, Vidar; Strømmen, Tonje; Lægreid, Astrid. (2005) Specific detection of alternative splice variants using oligonucleotide microarrays. 2nd ESF Functional Genomics Conference: Functional Genomics and Disease, Oslo 6-11 september 2005 2005-11-06 - 2005-11-11
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PosterBruland, Torunn; Eitrem, Berit Doseth; Anderssen, Endre; Beisvåg, Vidar; Lægreid, Astrid. (2005) Effects of choice and dose of dT blockers in cDNA microarray experiments. NBS NBS Contact meeting , Tromsø 2005-01-19 - 2005-01-22
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PosterWeen, Ola; Beisvåg, Vidar; Strømmen, Tonje; Lægreid, Astrid. (2005) Specific detection of alternative splice variants using oligonucleotide microarrays. 2nd ESF Functional Genomics Conference: Functional Genomics and Disease, Oslo 6-11 september 2005 2005-11-06 - 2005-11-11
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PosterGunther, Clara-Cecilie; Langaas, Mette; Lydersen, Stian; Beisvåg, Vidar; Jynge, Frode Romstad Krohn; Bergum, Hallgeir. (2005) Statistical Hypothesis Testing of Association Between Two Reporter Lists Within the GO-hierarchy. European Meeting of Statisticians , Oslo 2005-07-23 - 2005-07-28
2003
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Academic lectureThommesen, Liv; Bergum, Hallgeir; Langaas, Mette; Beisvåg, Vidar; Sandvik, Arne K.; Bruland, Torunn. (2003) Rat Microarray Analysis Resources. Meetings on rat genomics and Models , Cold Spring Harbor Laboratory, NY 2003-12-11 - 2003-12-14
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Academic lectureWitsø, Eivind; Beisvåg, Vidar; Langaas, M.; Lysvand, Hilde; Persen, Leif; Lægreid, Astrid. (2003) DNA microarray: A new diagnostic tool in orthopaedic infections?. 22nd Annual Meeting: European Bone and Joint Infection Society , Trondheim 2003-05-10 -
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Academic lectureThommesen, Liv; Bergum, Hallgeir; Langaas, Mette; Beisvåg, Vidar; Sandvik, Arne Kristian; Bruland, Torunn. (2003) Rat Microarray Analysis Resources. Meetings on rat genomics and Models , Cold Spring Harbor Laboratory, NY 2003-12-14 -
2002
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PosterArbo, Ingerid; Beisvåg, Vidar; Loenneche, Jan P.; Ellingsen, Øyvind. (2002) Expression of the sodium-hydrogen exchanger (NHE-1) in infarcted rat myocardium measured by competitive RT-PCR. Norsk biokjemisk selskap: 38. Biokjemiske kontaktmøte, Røros, 17.-20. januar 2002 , Røros 2002-01-20 -
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PosterBeisvåg, Vidar; Jølsum, Lars; Kusnierczyk, Waclaw; Langaas, Mette; Alsberg, Bjørn Kåre; Bergum, Hallgeir. (2002) eGOn � a new tool for mapping microarray data onto the Gene Ontology structure. EBI Standards and Ontologies for Functional Genomics , Hinxton 2002-11-17 - 2002-11-20
1999
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Popular scientific lectureWisløff, Ulrik; Loenneche, Jan P.; Falck, Geir; Beisvåg, Vidar; Smith, Godfrey; Ellingsen, Øyvind. (1999) Endothelin-1, ANF and IGF-1 gene expression in training induced cardiac hypertrophy. 4th annual congress of the european college of sport science , Rome 14-17 July 1999
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Popular scientific lectureWisløff, Ulrik; Loenneche, Jan P.; Falck, Geir; Beisvåg, Vidar; Helgerud, Jan; Smith, Godfrey. (1999) Increased contractility and calcium sensitivity in myocytes isolated from endurance trained rats. 4th annual congress of the european college of sport science , 14-17 July 1999
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Academic lectureWisløff, Ulrik; LOennechen, J.P.; Falck, G.; Beisvåg, V.; Helgerud, Jan; Smith, G.L.. (1999) Increased contractility and calcium sensitivity in myocytes isolated from endurance trained rats. Kardiologisk vårmøte , Oslo 1999
1998
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Academic lectureLoenneche, Jan P.; Beisvåg, Vidar; Arbo, Ingerid; Waldum, Helge; Sandvik, AK; Knardahl, Stein. (1998) Økt genuttrykk for endotelin-1 i myokard fra rotte ved CO eksponering svarende til røyking. Cardiologisk Vårmøte , Bergen
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Academic lectureLoenneche, Jan P.; Støylen, Asbjørn; Beisvåg, Vidar; Ellingsen, Øyvind. (1998) Diastolisk vegstress korrelerer med ET-1 og ANF genuttrykk i myokard fra rotte etter eksperimentelt hjerteinfarkt. Cardiologisk vårmøte , Bergen
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Academic lectureLoenneche, Jan P.; Beisvåg, Vidar; Arbo, Ingerid; Waldum, Helge; Sandvik, AK; Knardahl, Stein. (1998) Chronic carbonmonoxide exposure increases endothelin-1 expression in rat myocardium in vivo. 71st Scientific Sessions , Dallas